Usage of a HPC cluster

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Here we collect some general (and by no means complete) information about usage and policies of a HPC cluster.

Structure of a HPC cluster

The structure of a HPC system is sketched in the picture above. These are the main logical building blocks:

  • a login node is exposed to users for access (typically via ssh),
  • a dedicated scheduler (the queuing system) dispatches computational jobs to the compute nodes
  • computation happens therefore asynchronously (in batch mode), and not on the login node.
  • a specific software environment is provided on the login node and on the compute node to run parallel jobs
  • the above cluster structure is used from commodity local machines to large scale HPC architectures (as shown below for the Summit machine at Oak-Ridge Natl Lab (ORNL), TN, USA)

File:Summit ORNL.jpg

Connecting

Unless other means are provided, you typically connect using the ssh protocol.

From a shell terminal or a suitable app:

 ssh -Y <user>@<machine_host_name>  or
 ssh -Y -l <user> <machine_host_name>
 <user>:  Unix username on the cluster login node